Sign In

Quick Links

  • Feature Search:Search for features by type. Filter on an additional text query if desired.
  • Gene Expression Publications: Search and browse publications with gene expression data that are stored in TBDB.
  • Samples and Conditions:
    Search for a gene over all published samples and explore the expression significance of the indicated gene.
  • Expression Profiles:
    Search for a gene in the published data sets. You will be able to explore the gene expression of the indicated gene in each publication.
  • My Repository (sign in required): Access your saved microarray data sets for further analysis.
  • BLAST - search all genomes by sequencing similarity
  • Genes - Gene annotations by functional categories
  • Download - download data files for sequence and annotation
  • M. tuberculosis H37Rv: Rv0007 - conserved membrane protein

    << Previous Gene on Contig (Rv0006 ) Next Gene on Contig (Rv0008c ) >>
    VIEWS & TOOLS
    expression
    regulation
    genome analysis
    Curated Citations
    0
    Orthologs
    Reactions
    0
    Pathways
    0
    COG Annotation
    0
    GO Annotations
    0
    Protein Structures
    0
    Gene Profiles
    Expression Conditions
    SNPs
    Operons
    Epitopes
    0
    Legend
    Protein Domains
    Gene Id : 7000000635248040
    Gene Info Collapse
    Locus Rv0007
    Gene Symbol
    Synonyms  
    Gene Name conserved membrane protein  
    Closely Related Orthologs conserved hypothetical protein ?
    Location M. tuberculosis H37Rv: Chromosome 1: 9914-10828 +
    Length Gene: 915 nt
    Protein: 304 aa
    External Links TubercuList ?
    TBSGC Protein Structure Information ?
    TARGET Gene Information ?
    Search Google Scholar ?
    Protein Domains View Gene Neighborhood with Protein Domains and Polymorphisms
    Diversity Graph Collapse
     
    View Multiple Alignment of Diversity Strains for Rv0007
    Show All SNPs in Diversity Strains for Rv0007
    Gene Expression Collapse
    Gene Expression Data
    Gene Profiles ?
    Samples And Conditions ?
    Genes with Correlated Expression
    Scatterplot of Gene Expression
    Functional Annotations Collapse
    Operons Rv0007-Rv0007 ? Operon
    TraSH Essentiality
    (see Sassetti et al., 2003)
    Not Essential
    Tools Collapse
    Display Options
    Tools
    Publications Awaiting Curatorial Review Collapse
    Q. Gao, KE. Kripke et al.Gene expression diversity among Mycobacterium tuberculosis clinical isolates.Microbiology (Reading, Engl.)2005
    curated sgi 2009-07-27
    X. Pang, P. Vu et al.Evidence for complex interactions of stress-associated regulons in an mprAB deletion mutant of Mycobacterium tuberculosis.Microbiology (Reading, Engl.)2007
    curated sgi 2009-07-27
    Q. Gao, K. Kripke et al.Comparative expression studies of a complex phenotype: cord formation in Mycobacterium tuberculosis.Tuberculosis (Edinb)2004
    curated sgi 2009-07-27
    R. Manganelli, MI. Voskuil et al.The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages.Mol. Microbiol.2001
    curated sgi 2009-07-27
    HD. Park, KM. Guinn et al.Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis.Mol. Microbiol.2003
    curated sgi 2009-07-28
    DR. Sherman, M. Voskuil et al.Regulation of the Mycobacterium tuberculosis hypoxic response gene encoding alpha -crystallin.Proc. Natl. Acad. Sci. U.S.A.2001
    curated sgi 2009-07-28
    MI. Voskuil, KC. Visconti et al.Mycobacterium tuberculosis gene expression during adaptation to stationary phase and low-oxygen dormancy.Tuberculosis (Edinburgh, Scotland)2004
    curated sgi 2009-07-28
    MI. Voskuil, D. Schnappinger et al.Inhibition of respiration by nitric oxide induces a Mycobacterium tuberculosis dormancy program.J. Exp. Med.2003
    curated sgi 2009-07-28
    HI. Boshoff, TG. Myers et al.The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism: novel insights into drug mechanisms of action.J. Biol. Chem.2004
    curated sgi 2009-07-28
    RP. Morris, L. Nguyen et al.Ancestral antibiotic resistance in Mycobacterium tuberculosis.Proc. Natl. Acad. Sci. U.S.A.2005
    curated sgi 2009-07-28
    N. Andreu & I. GibertCell population heterogeneity in Mycobacterium tuberculosis H37Rv.Tuberculosis (Edinb)2008
    curated sgi 2009-07-28
    TR. Rustad, MI. Harrell et al. The enduring hypoxic response of Mycobacterium tuberculosis. PLoS ONE 2008 PMID:18231589
    curated sgi 2009-07-29
    R. Manganelli, MI. Voskuil et al. Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression. Mol. Microbiol. 2002 PMID:12123450
    curated sgi 2009-07-30
    GM. Rodriguez, MI. Voskuil et al.ideR, An essential gene in mycobacterium tuberculosis: role of IdeR in iron-dependent gene expression, iron metabolism, and oxidative stress response.Infect. Immun.2002
    curated sgi 2009-07-27
    G. Rehren, S. Walters et al.Differential gene expression between Mycobacterium bovis and Mycobacterium tuberculosis.Tuberculosis (Edinb)2007
    curated sgi 2009-07-28
    Overlapping Features Expand
    Sequence Collapse
    Proteins
    Genomic Sequence